global properties
width, height, depth and much more..
spanning = gscale_tree ({tree})
total cable length
sum (len_tree (tree))
total membrane surface
sum (surf_tree (tree))
terminal density
M = gdens_tree
(tree, sr, T_tree (tree))
number of branches
sum (B_tree (tree))*2+1
number of tips (related measure…)
sum (T_tree (tree))
hull/area properties
surface
[a b c area] = vhull_tree
(tree,[],[],[],[],'-2d‘); sum (area)
volume
[a b c volume] = vhull_tree
(tree); sum (volume)
branch statistics and distributions
diameter
tree.D
segment membrane surfaces
surf_tree (tree)
segment volumes
vol_tree (tree)
branch order
BO_tree (tree)
Euclidean distance
eucl_tree (tree)
metric path distance
Pvec_tree (tree)
terminal diameters
tree.D (T_tree (tree))
sholl analysis
sholl_tree (tree)
ratios
branch asymmetry
e.g. asym_tree (tree)
tapering
e.g. ratio_tree (tree, tree.D)
distance to root path vs. euclidian
Pvec_tree (tree) /
eucl_tree (tree)
in general
stats_tree and
gscale_tree can be helpful
combinations
be creative...
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