adapted from
PLoS supp. material
by Hermann Cuntz
adapted from
PLoS supp. material
by Hermann Cuntz
Tries to derive diameter values for tree intree
based on the underlying image stack stack.
maxR determines a threshold maximum radius
for a segment in the tree
(should be much larger than the maximum radius,
but of course not too large...).
Example:
Here applied on a sample tree reconstructed from a sample stack:
>> D = fitD_stack (tree, stack, 50)
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